alright out of phase means that one sub is pumping out the right way, and one is reversed, causing it to be backwards on the hits. let us know what impedances your subs are. are they single voice coil or dual? 2ohm or 4ohm? when you let us know the details, we can tell you exactly how to hook it up to make them perform the best..
ive seen cases where they will be 2 ohm single voice coil subs, and since the amp isnt 1 ohm stable, it will be wired to 4ohms... cutting the output in half.. when you cut the output in half and run 2 subs, each sub is only getting about 75 watts. just let us know and we will be more than happy to help.