First, know that I have limited experience. But I can't help but think it's a HU setting that's not allowing any output, or possibly bad outputs on both HUs. That does seem unlikely, but obviously possible. You've already eliminated subs, amp and wiring as possible causes, right? I'm not sure the best way to explain this, but have you tried adjusting all the filters and settings on the HU to allow the maximum range of frequencies to get to your sub amp? Also, did you try the DMM on the HU outputs?