It is possible that the sub was just a lemon, other explinations would be that the amps gain is low but the HU ouput is very high and your still getting a lot of clipping, or that the new ground is bad and causing the amp to distort for various reasons, or if you threw it in and just started jamming it, it may have had transient shock, or even if the new subwoofer required more space in the enclosure and you just used the same one the volume contraints did it in. If you give us a little more info we might can narrow it down for ya. What kind of sub was it?