I have to disagree completely on the ease of use with smaller volume boxes. With a .5ft^3 box tuned to 35hz, a 3" aero is going to need to be 30" long. Have fun buying elbows and more PVC to fit that inside a box or you can have an ugly external aero hanging out of the box, taking up a lot of space. With a slot, you can easily follow the outside of the box and get the port length needed. Also, using a 3" aero that has a ~4.5" diameter flare is going to require a decent sized box just to make sure you have enough clearance with the port/sub being so close. With that 30" custom aero, it's doubtful you can even fit it inside a box(depending on the sub/port orientation that you needed to do) and still keep your .5ft^3 net volume that you'd be after.
Basically, with a smaller box you're going to need a longer port. And using a smaller volume while trying to tune any lower than 35hz with aeros is going to require you to make them a custom length, which adds to the cost as well. It would be much easier to use an aeroport on a lower power, more efficient setup that utilizes a larger than normal box volume. That way you could rely on a shorter port length and not have to worry as much about internal clearances.