lolz.personally owning an explorer, i would never ever build a box even close to the roof.
Slap a few layers of Damp Pro and it'll stiffen up //content.invisioncic.com/y282845/emoticons/wink.gif.608e3ea05f1a9f98611af0861652f8fb.giflolz.Ex 2.
They have weak roofs and won't really handle the pressure well. You'll lose those precious DBZ.
Try to stay as far away as you can.
Sub up, ports back yields the highest SPL in explorers.In an explorer, dont build the box higher than the back seat, and make sure that the subs are in the front 1/2 of the box to prevent mass hatch rattle. I don't know what to say about your port back idea, cause mine's sub/port up, but I still get some rattle.