I called audioque up and got the directions in case if anyone is interested.

1) Bass knob mounted
2) Go to amp turn gain all the way down.
3) Subsonic and Low Pass 6 o'clock.
4) Bass Boost all the way down.
5) Kenwood/deck set everything to 0. (will sound bland)
6) Turn volume up to 3 quarters of max volume, on the deck. Or as loud as everything sounds good
7) Set the mid, hi, low on deck (Listen to music you listen to) Shoot for a clean sound.
8) Turn up bass knob to 3 qtr of way to all the way.
9) Slowly turn the gain up until the clip light barely flash (probably half gain, or a little over half) Keep the gain right under where the clip light barely flashes.